| QTL Map Information |
|---|
| Chromosome: | 25 |
| QTL Peak Location: | 56.73 (cM) |
| QTL Span: | 56.73-56.73 (cM)
35.0-35.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs134690880 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.046876273 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | CUX1 (cut like homeobox 1) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Danish Holstein and Danish Jersey dairy cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for milk fat traits. A total of 494,984 SNPs were used in both breeds. |
| Analysis: | Linear models were used. |
| Software: | DMU |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Buitenhuis B, Janss LL, Poulsen NA, Larsen LB, Larsen MK, Sørensen P |
| Affiliation: | Department of Molecular Biology and Genetics, Aarhus University, Center for Quantitative Genetics and Genomics, Blichers Allé 20, P,O, Box 50, DK-8830 Tjele, Denmark |
| Title: | Genome-wide association and biological pathway analysis for milk-fat composition in Danish Holstein and Danish Jersey cattle |
| Journal: | BMC genomics, 2014, 15(1): 1112 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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