| QTL Map Information |
|---|
| Chromosome: | 3 |
| QTL Peak Location: | 90.35 (cM) |
| QTL Span: | 90.35-90.35 (cM)
86.1-86.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs110220315 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were variable fractions of Angus, Hereford, Red Angus, Brahman, Charolais, Gelbvieh, Limousin, Simmental, and MARC III cattle. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped using the Illumina BovineHD or BovineSNP50 array and analyzed for circulating 25-hydroxyvitamin D concentration. |
| Analysis: | A mixed model was used. |
| Software: | R software |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Casas E, Leach R J, Reinhardt T A, Thallman R M, Lippolis J D, Bennett G L, Kuehn L A |
| Affiliation: | USDA, ARS, National Animal Disease Center, Ames, IA 50010, USA |
| Title: | A genomewide association study identified CYP2J2 as a gene controlling serum vitamin D status in beef cattle |
| Journal: | Journal of animal science, 2013, 91(8): 3549-56 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | At weaning |
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