| QTL Map Information |
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| Chromosome: | 11 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
103.3-103.3 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs385328050 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
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P_values | 1.23E-06 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
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| Animals: | Animals were Norwegian Red cattle. |
| Breeds associated:
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| Design: | Bulls were genotyped using at least one of the following arrays: Affymetrix 25K SNP array, a custom Affymetrix 50K SNP array, Illumina 54K BovineSNP50 BeadChip, or 777K Illumina Bovine HD BeadChip. Data were imputed to HD and GWAS were performed for milk C16:0 and C18:1cis-9 concentration. A total of 609,361 SNPs were used for analysis. A region on BTA11 was further analyzed using sequence-level variants. |
| Analysis: | A mixed linear model single-marker association analysis was performed using the --mlma-loco option of GCTA. |
| Software: | Beagle v4.1, DMU v6 release 5.1, GCTA, ASReml v3.0, Haploview 4.2 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Knutsen TM, Olsen HG, Ketto IA, Sundsaasen KK, Kohler A, Tafintseva V, Svendsen M, Kent MP, Lien S |
| Affiliation: | AquaGen AS, P.O. Box 1240, 7462, Trondheim, Norway |
| Title: | Genetic variants associated with two major bovine milk fatty acids offer opportunities to breed for altered milk fat composition |
| Journal: | Genetics, Selection, Evolution : GSE, 2022, 54(1): 35 |
| Links: |
PubMed | Abstract | List all data
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