| QTL Map Information |
|---|
| Chromosome: | 25 |
| QTL Peak Location: | 10.35 (cM) |
| QTL Span: | 10.35-10.35 (cM)
6.4-6.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs110987425 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | 4.09E-02 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein-Friesian cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for milk production traits. A total of 40668 SNPs were used for analyses. |
| Analysis: | A single-SNP regression model and a Bayesian method were used. |
| Software: | R, ASReml |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Meredith BK, Kearney FJ, Finlay EK, Bradley DG, Fahey AG, Berry DP, Lynn DJ |
| Affiliation: | Animal and Bioscience Research Department, Teagasc, Animal & Grassland Research and Innovation Centre, Grange, Dunsany, Co, Meath, Ireland |
| Title: | Genome-wide associations for milk production and somatic cell score in Holstein-Friesian cattle in Ireland |
| Journal: | BMC genetics, 2012, 13: 21 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Single-SNP regression analysis; DYD |
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