| QTL Map Information |
|---|
| Chromosome: | 5 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
90.5-90.5 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs110916557 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Chromosome-wise |
| Threshold significance level: | Significant |
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P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were North American Holstein cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using Illumina medium-density SNP panels, with data imputed to HD then to whole-genome sequence, and association analysis was performed for milk production traits and lactation persistency. A range of 5,108,861-6,101,357 SNPs were used for the analyses. |
| Analysis: | Mixed linear models were used for GWAS. |
| Software: | Fimpute, PLINK, GCTA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Pedrosa VB, Schenkel FS, Chen SY, Oliveira HR, Casey TM, Melka MG, Brito LF |
| Affiliation: | Department of Animal Sciences, Purdue University, West Lafayette, IN 47907, USA |
| Title: | Genomewide Association Analyses of Lactation Persistency and Milk Production Traits in Holstein Cattle Based on Imputed Whole-Genome Sequence Data |
| Journal: | Genes, 2021, 12(11):1830 |
| Links: |
PubMed | Abstract | List all data
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