| QTL Map Information |
|---|
| Chromosome: | 15 |
| QTL Peak Location: | 82.65 (cM) |
| QTL Span: | 82.65-82.65 (cM)
60.9-60.9 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs109416226 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.03 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein heifers. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineHD BeadChip or Neogen Bovine GGP50 BeadChip (imputed to HD) and analyzed for heifer conception rate and number of times bred. A total of 633,444 SNPs were used for analysis. |
| Analysis: | GWAS was performed using an efficient mixed-model association expedited approach with an identity-by-state kinship matrix (EMMAX-IBS). Additive, dominant, and recessive models were used. |
| Software: | Beagle, SVS v8.1 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Galliou JM, Kiser JN, Oliver KF, Seabury CM, Moraes JGN, Burns GW, Spencer TE, Dalton J, Neibergs HL |
| Affiliation: | Department of Animal Sciences and Center for Reproductive Biology, Washington State University, Pullman, WA 99164, USA |
| Title: | Identification of Loci and Pathways Associated with Heifer Conception Rate in U.S. Holsteins |
| Journal: | Genes, 2020, 11(7) |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | heifers |
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