| QTL Map Information |
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| Chromosome: | 6 |
| QTL Peak Location: | 41.92 (cM) |
| QTL Span: | 41.92-41.92 (cM)
38.0-38.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs110537004 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
FDR | 7.36E-10 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Canadian beef cattle comprised of Angus, Charolais, Kinsella Composite, Elora crossbred Angus, Simmental, Charolais, and others), and commercial crossbred (Angus, Charolais, Hereford, Simmental, Limousin, Gelbvieh). |
| Breeds associated:
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| Design: | Animals were genotyped using the bovine 50K SNP chip, with data imputed to whole-genome sequence, and analyzed for carcass traits. A total of 7,853,211 variants were used for analysis. |
| Analysis: | GWAS was performed using a single-SNP-based mixed linear model. |
| Software: | GCTA, FImpute v2.2 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Wang Y, Zhang F, Mukiibi R, Chen L, Vinsky M, Plastow G, Basarab J, Stothard P, Li C |
| Affiliation: | Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada |
| Title: | Genetic architecture of quantitative traits in beef cattle revealed by genome wide association studies of imputed whole genome sequence variants: II: carcass merit traits |
| Journal: | BMC genomics, 2020, 21(1): 38 |
| Links: |
PubMed | Abstract | List all data
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