| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | 49.99 (cM) |
| QTL Span: | 49.70-50.29 (cM)
45.0-45.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs109191200 |
| Peak: | rs110408618 |
| Lower, "Significant": | rs135082644 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
VARIANCE | 1.0% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Montbéliarde cows. |
| Breeds associated:
|
| Design: | Animals were genotyped using either the BovineSNP50 or the EuroG10K BeadChips, with data imputed to whole-genome sequence, and analyzed for cheese-making and milk composition traits. A total of 8,551,748 imputed WGS variants were used for analysis. |
| Analysis: | Mixed linear models were used for GWAS. |
| Software: | Fimpute, Minimac, GCTA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Sanchez MP, Ramayo-Caldas Y2, Wolf V, Laithier C, El Jabri M, Michenet A, Boussaha M, Taussat S, Fritz S, Delacroix-Buchet A, Brochard M, Boichard D |
| Affiliation: | GABI, INRA, AgroParisTech, Université Paris Saclay, 78350, Jouy-en-Josas, France |
| Title: | Sequence-based GWAS, network and pathway analyses reveal genes co-associated with milk cheese-making properties and milk composition in Montbéliarde cows |
| Journal: | Genetics, Selection, Evolution : GSE, 2019, 51(1): 34 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | At rennet coagulation time, in firm index (soft cheese) |
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