| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | 13.38 (cM) |
| QTL Span: | 13.38-13.38 (cM)
14.7-14.7 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs110633489 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Suggestive |
 |
FDR | <0.10 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #164668
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Angus, Charolais, Hereford, Simmental, Limousin, Angus-Hereford crossbred, Angus-Simmental crossbred, Charolais-Red Angus crossbred, Kinsella composite (Hereford/Angus/Holstein), Beefbooster TX composite (Charolais/Holstein/Maine Anjou/Chianina), and other breed combinations. |
Breeds associated:
Charolais, Chianina, Gelbvieh, Hereford, Holstein, Limousin, Piedmontese, Red angus, Simmental, Angus, Maine-Anjou
|
| Design: | Animals were genotyped using the 50K SNP panel and analyzed for growth, carcass, and meat quality traits. A total of 42,610 SNPs were used for analysis. |
| Analysis: | A single-SNP GWAS for the joint association of additive and dominance effects was performed using a linear mixed effect model. |
| Software: | FImpute, ASReml |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Akanno EC, Chen L, Abo-Ismail MK, Crowley JJ, Wang Z, Li C, Basarab JA, MacNeil MD, Plastow GS |
| Affiliation: | Livestock Gentec, Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada |
| Title: | Genome-wide association scan for heterotic quantitative trait loci in multi-breed and crossbred beef cattle |
| Journal: | Genetics, Selection, Evolution : GSE, 2018, 50(1): 48 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | purebred and crossbred populations combined |
User inputs on reference #30290764
Add your comments
Note similar findings
Note contradictions
|
