| QTL Map Information |
|---|
| Chromosome: | 13 |
| QTL Peak Location: | 5.40 (cM) |
| QTL Span: | 5.40-5.40 (cM)
4.5-4.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs42382046 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using either 50K or HD SNP chips, with all data imputed to HD, and analyzed for calving and body conformation traits. A total of 601,717 SNPs were used for analysis. |
| Analysis: | A single-SNP mixed linear model was used. |
| Software: | FImpute, PLINK, snp1101, SNP2GO in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Abo-Ismail MK, Brito LF, Miller SP, Sargolzaei M, Grossi DA, Moore SS, Plastow G, Stothard P, Nayeri S, Schenkel FS |
| Affiliation: | Department of Animal Biosciences, Centre for Genetic Improvement of Livestock, University of Guelph, Guelph, ON, Canada |
| Title: | Genome-wide association studies and genomic prediction of breeding values for calving performance and body conformation traits in Holstein cattle |
| Journal: | Genetics, Selection, Evolution : GSE, 2017, 49(1): 82 |
| Links: |
PubMed | Abstract | List all data
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| Additional Information |
|---|
| Comments: | EBV |
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