| QTL Map Information |
|---|
| Chromosome: | 5 |
| QTL Peak Location: | 58.31 (cM) |
| QTL Span: | 57.56-59.06 (cM)
52.0-53.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs110205236 |
| Peak: | |
| Lower, "Significant": | rs110458100 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | 1.14E-2 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for milk traits. A total of 41,099 autosomal SNPs were used for analysis. |
| Analysis: | SNP effects on milk traits were estimated using ridge regression. |
| Software: | PLINK, BLUPF90, BEAGLE, R software |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Shin D, Lee C, Park KD, Kim H, Cho KH |
| Affiliation: | National Institute of Animal Science, RDA, Cheonan, Korea |
| Title: | Genome-association analysis of Korean Holstein milk traits using genomic estimated breeding value |
| Journal: | Asian-Australasian journal of animal sciences, 2017, 30(3):309-319 |
| Links: |
PubMed | Abstract | List all data
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