Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 11289 Description:

 Trait Information
Trait name: Longissimus muscle area Vertebrate Trait Ontology: Longissimus thoracis muscle area
Reported name: Longissimus muscle area Product Trait Ontology: n/a
Symbol: LMA Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:29
QTL Peak Location:19.58 (cM)
QTL Span:19.58-29.20 (cM)
14.3-21.4 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":BMS1787
Peak:BMS1787
Lower, "Significant":BMS1600
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:Mendelian
Test base:Chromosome-wise
Threshold significance level:Significant
P_values0.000112201845
Dominance effect:0.0161
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Twenty-nine generations of commercial American Angus.
     Breeds associated:
    Design:Genome scan with 402 markers at 8 cM intervals on 14 cattle production traits using 3391 animals from 48 half-sib families.
    Analysis:General pedigrees based genetic model analysis using least squares regression and Bayesian Markov chain Monte Carlo analysis.
    Software:GridQTL, LOKI
    Notes:Not a cross based segregation analysis
    Links:Edit

     Reference
    Authors:McClure MC, Morsci NS, Schnabel RD, Kim JW, Yao P, Rolf MM, McKay SD, Gregg SJ, Chapple RH, Northcutt SL, Taylor JF.
    Affiliation:Division of Animal Sciences, University of Missouri, Columbia
    Title:A genome scan for quantitative trait loci influencing carcass, post-natal growth and reproductive traits in commercial Angus cattle.
    Journal:Animal Genetics, 2010, 41 (6): 597-607
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:SNP scan
    User inputs on reference #20477797
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  • Cite this Data:

    Animal QTLdb: QTL11289 was published in 2010, and was curated into QTLdb on 2011-11-11. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:11289

     

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