Release 56
(Apr 24, 2025)

QTL 110738 Description:

 Trait Information
Trait name: Milk kappa-casein percentage Vertebrate Trait Ontology: Milk kappa-casein amount
Reported name: (n/a) Product Trait Ontology: Milk kappa-casein content
Symbol: MKCASP Clinical Measurement Ontology: Milk kappa-casein percentage
 QTL Map Information
Chromosome:11
QTL Peak Location:51.19 (cM)
QTL Span:51.19-51.19 (cM)
42.8-42.9 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs41572782
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Significant
P_values0.0083
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #110738
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Danish Holstein and Danish Jersey cattle.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for milk protein composition traits. A total of 494,984 SNPs were used for analysis.
    Analysis:Analyses were performed using restricted maximum likelihood (REML).
    Software:DMU, Haploview, R software, METAL
    Notes: 
    Links:Edit

     Reference
    Authors:Buitenhuis B, Poulsen NA, Gebreyesus G, Larsen LB
    Affiliation:Department of Food Science, Aarhus University, Blichers Allé 20, P.O. Box 50, Tjele, DK-8830, Denmark
    Title:Estimation of genetic parameters and detection of chromosomal regions affecting the major milk proteins and their post translational modifications in Danish Holstein and Danish Jersey cattle
    Journal:BMC genetics, 2016, 17: 114
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #27485317
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL110738 was published in 2016, and was curated into QTLdb on 2016-09-29. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:110738

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team