| QTL Map Information |
|---|
| Chromosome: | 19 |
| QTL Peak Location: | 93.92 (cM) |
| QTL Span: | 93.92-93.92 (cM)
51.5-51.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs41919926 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 0.07 | | P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #107673
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Japanese Black cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip v2 and analyzed for carcass traits, fatty acid composition, chemical composition, and sugar content. A total of 40,657 SNPs on the array were used for analysis, in addition to SNPs in five candidate genes. |
| Analysis: | A linear mixed model was used. |
| Software: | PLINK, GEMA, ASReml |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Sasago N, Abe T, Sakuma H, Kojima T, Uemoto Y |
| Affiliation: | National Livestock Breeding Center, Nishigo, Fukushima, Japan |
| Title: | Genome-wide association study for carcass traits, fatty acid composition, chemical composition, sugar, and the effects of related candidate genes in Japanese Black cattle |
| Journal: | Animal science journal = Nihon chikusan Gakkaiho, 2016, 88(1):33-44 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #27112906
Add your comments
Note similar findings
Note contradictions
|
