Cattle QTL Database

Release 55
(Dec 23, 2024)

Curator: Cari Park
Curated: 2021-12-21
Updated: 2024-04-23

Publication # 34688258 Details

Authors:	Rafter P, Gormley IC, Purfield D, Parnell AC, Naderi S, Berry DP (Contact: donagh.berry@teagasc.ie)
Affiliation:	Animal & Grassland Research and Innovation Centre, Teagasc, Moorepark, Cork, Fermoy, Ireland
Title:	Genome-wide association analyses of carcass traits using copy number variants and raw intensity values of single nucleotide polymorphisms in cattle
Journal:	BMC Genomics, 22(1): 757 (2021)	DOI: 10.1186/s12864-021-08075-2
Links:	PubMed \| Abstract \|	( Related study: none )
Click on each trait to browse further along the related trait ontology tree Click on each chromosome number to find the detailed QTL information on that chromosome Number of QTL/association reported by traits: QTL for Carcass conformation score reported for chromosome(s): Chr.2: QTL:239939. Chr.7: QTL:239951. Chr.10: QTL:239924, QTL:239925. Chr.11: QTL:239927, QTL:239929. Chr.16: QTL:239931. Chr.20: QTL:239937. Chr.21: QTL:239941. Chr.22: QTL:239944. Chr.25: QTL:239947. QTL for Fat cover reported for chromosome(s): Chr.1: QTL:239935. Chr.2: QTL:239940. Chr.7: QTL:239952. Chr.10: QTL:239926. Chr.11: QTL:239928, QTL:239930. Chr.16: QTL:239932, QTL:239933. Chr.20: QTL:239938. Chr.21: QTL:239942. Chr.22: QTL:239945. Chr.25: QTL:239948. QTL for Carcass weight reported for chromosome(s): Chr.1: QTL:239934. Chr.7: QTL:239949, QTL:239950. Chr.8: QTL:239953. Chr.9: QTL:239954. Chr.20: QTL:239936. Chr.22: QTL:239943. Chr.25: QTL:239946. QTL/association Reported by chromosomes: Chr.1 (2), Chr.2 (2), Chr.7 (4), Chr.8 (1), Chr.9 (1), Chr.10 (3), Chr.11 (4), Chr.16 (3), Chr.20 (3), Chr.21 (2), Chr.22 (3), Chr.25 (3). Number of gene-based eQTL/associations: None

Cite this Dataset:

Animal QTLdb: Dataset from Rafter P, Gormley IC, Purfield D, Parnell AC, Naderi S, Berry DP (2021). Genome-wide association analyses of carcass traits using copy number variants and raw intensity values of single nucleotide polymorphisms in cattle. BMC Genomics, 22(1): 757; Curated into QTLdb on 2021-12-21. Universal link to this data set: https://www.animalgenome.org/QTLdb/supp/?t=QzNn6B0QlX

Rafter P, Gormley IC, Purfield D, Parnell AC, Naderi S, Berry DP (2021). Genome-wide association analyses of carcass traits using copy number variants and raw intensity values of single nucleotide polymorphisms in cattle. BMC Genomics, 22(1): 757; DOI: https://dx.doi.org/10.1186/s12864-021-08075-2

Publication # 34688258 Details

Number of QTL/association reported by traits:

QTL/association Reported by chromosomes:

Number of gene-based eQTL/associations: