Chicken QTL Database

Release 55
(Apr 24, 2025)

Curator: Cari Park
Curated: 2017-02-07
Updated: 2024-04-23

Publication # 19607653 Details

Authors:	Abasht B, Sandford E, Arango J, Settar P, Fulton JE, O'Sullivan NP, Hassen A, Habier D, Fernando RL, Dekkers JCM, Lamont SJ (Contact: abasht@iastate.edu)
Affiliation:	Department of Animal Science and Center for Integrated Animal Genomics, Iowa State University, Ames, IA 50011, USA
Title:	Extent and consistency of linkage disequilibrium and identification of DNA markers for production and egg quality traits in commercial layer chicken populations
Journal:	BMC Genomics, 10 Suppl 2: S2 (2009)	DOI: 10.1186/1471-2164-10-S2-S2
Links:	PubMed \| Abstract \|	( Related study: none )
Click on each trait to browse further along the related trait ontology tree Click on each chromosome number to find the detailed QTL information on that chromosome Number of QTL/association reported by traits: QTL for Yolk weight reported for chromosome(s): Chr.1: Asso:125341, Asso:125343, Asso:125344, Asso:125345. Chr.4: Asso:125355. Chr.11: Asso:125362. Chr.13: Asso:125364. Chr.25: Asso:125465. QTL for Egg production rate reported for chromosome(s): Chr.1: Asso:125342. Chr.3: Asso:125350. Chr.7: Asso:125361. Chr.20: Asso:125369. Chr.24: Asso:125372. QTL for Egg weight reported for chromosome(s): Chr.1: Asso:125346, Asso:125457, Asso:125458. Chr.2: Asso:125348. Chr.3: Asso:125349. Chr.4: Asso:125353, Asso:125354. Chr.6: Asso:125359. Chr.19: Asso:125368. Chr.24: Asso:125371. Chr.27: Asso:125373. QTL for Age at first egg reported for chromosome(s): Chr.1: Asso:125347. Chr.4: Asso:125352. Chr.5: Asso:125358. Chr.18: Asso:125367. Chr.20: Asso:125463, Asso:125464. QTL for Albumen height reported for chromosome(s): Chr.Z: Asso:125374. Chr.3: Asso:125351. Chr.5: Asso:125356, Asso:125357. Chr.18: Asso:125365, Asso:125366. Chr.19: Asso:125462. Chr.23: Asso:125370. QTL for Eggshell strength reported for chromosome(s): Chr.7: Asso:125360, Asso:125459, Asso:125460, Asso:125461. Chr.12: Asso:125363. QTL/association Reported by chromosomes: Chr.Z (1), Chr.1 (9), Chr.2 (1), Chr.3 (3), Chr.4 (4), Chr.5 (3), Chr.6 (1), Chr.7 (5), Chr.11 (1), Chr.12 (1), Chr.13 (1), Chr.18 (3), Chr.19 (2), Chr.20 (3), Chr.23 (1), Chr.24 (2), Chr.25 (1), Chr.27 (1). Number of gene-based eQTL/associations: None

Cite this Dataset:

Animal QTLdb: Dataset from Abasht B, Sandford E, Arango J, Settar P, Fulton JE, O'Sullivan NP, Hassen A, Habier D, Fernando RL, Dekkers JCM, Lamont SJ (2009). Extent and consistency of linkage disequilibrium and identification of DNA markers for production and egg quality traits in commercial layer chicken populations. BMC genomics, 10 Suppl 2: S2; Curated into QTLdb on 2017-02-07. Universal link to this data set: https://www.animalgenome.org/QTLdb/supp/?t=PyGi5H3WqT

Abasht B, Sandford E, Arango J, Settar P, Fulton JE, O'Sullivan NP, Hassen A, Habier D, Fernando RL, Dekkers JCM, Lamont SJ (2009). Extent and consistency of linkage disequilibrium and identification of DNA markers for production and egg quality traits in commercial layer chicken populations. BMC genomics, 10 Suppl 2: S2; DOI: https://dx.doi.org/10.1186/1471-2164-10-S2-S2

Publication # 19607653 Details

Number of QTL/association reported by traits:

QTL/association Reported by chromosomes:

Number of gene-based eQTL/associations: