=========================================== Genetic Lines =========================================== University of Nebraska - Lincoln Daniel Ciobanu Laboratory Trenhaile et al., 2016 (Animal Genetics) Data/populations used in the selection sweep Populations Illumina genotype file 1 Nebraska Index Line (NIL) 2013-11-24 2 Control line 2013-11-24 3 Duroc x Hampshire F1 6/21/2011;20/09/2011 =========================================== NIL & CTRL =========================================== University of Nebraska - Lincoln DC Labs - UNL Shipped to GeneSeek 11-5-13 by MT Porcine 60K Genotyping Columns: 1- Tube ID 2- AltID 3- Line year/generation 4- GeneSeek Illumina File 21G 111002011 CTRL 2011 2013-11-24 31G 111003011 CTRL 2011 2013-11-24 52G 111005021 CTRL 2011 2013-11-24 194G 111019041 CTRL 2011 2013-11-24 214G 111021041 CTRL 2011 2013-11-24 234G 111023041 CTRL 2011 2013-11-24 236G 111023061 CTRL 2011 2013-11-24 241G 111024011 CTRL 2011 2013-11-24 243G 111024031 CTRL 2011 2013-11-24 261G 111026011 CTRL 2011 2013-11-24 314G 111031041 CTRL 2011 2013-11-24 361G 111036011 CTRL 2011 2013-11-24 391G 111039011 CTRL 2011 2013-11-24 392G 111039021 CTRL 2011 2013-11-24 403G 111040031 CTRL 2011 2013-11-24 404G 111040041 CTRL 2011 2013-11-24 471G 111047011 CTRL 2011 2013-11-24 603G 111060031 CTRL 2011 2013-11-24 611G 111061011 CTRL 2011 2013-11-24 613G 111061031 CTRL 2011 2013-11-24 621G 111062011 CTRL 2011 2013-11-24 622G 111062021 CTRL 2011 2013-11-24 681G 111068011 CTRL 2011 2013-11-24 702G 111070021 CTRL 2011 2013-11-24 712G 111071021 CTRL 2011 2013-11-24 713G 111071031 CTRL 2011 2013-11-24 721G 111072011 CTRL 2011 2013-11-24 735G 111073051 CTRL 2011 2013-11-24 742G 111074021 CTRL 2011 2013-11-24 752G 111075021 CTRL 2011 2013-11-24 772G 111077021 CTRL 2011 2013-11-24 781G 111078011 CTRL 2011 2013-11-24 791G 111079011 CTRL 2011 2013-11-24 814G 111081041 CTRL 2011 2013-11-24 823G 111082031 CTRL 2011 2013-11-24 32B 111003022 CTRL 2011 2013-11-24 52B 111005022 CTRL 2011 2013-11-24 195B 111019052 CTRL 2011 2013-11-24 234B 111023042 CTRL 2011 2013-11-24 241B 111024012 CTRL 2011 2013-11-24 242B 111024022 CTRL 2011 2013-11-24 264B 111026042 CTRL 2011 2013-11-24 311B 111031012 CTRL 2011 2013-11-24 361B 111036012 CTRL 2011 2013-11-24 362B 111036022 CTRL 2011 2013-11-24 392B 111039022 CTRL 2011 2013-11-24 401B 111040012 CTRL 2011 2013-11-24 471B 111047012 CTRL 2011 2013-11-24 606B 111060062 CTRL 2011 2013-11-24 607B 111060072 CTRL 2011 2013-11-24 612B 111061022 CTRL 2011 2013-11-24 623B 111062032 CTRL 2011 2013-11-24 686B 111068062 CTRL 2011 2013-11-24 701B 111070012 CTRL 2011 2013-11-24 715B 111071052 CTRL 2011 2013-11-24 744B 111074042 CTRL 2011 2013-11-24 752B 111075022 CTRL 2011 2013-11-24 782B 111078022 CTRL 2011 2013-11-24 794B 111079042 CTRL 2011 2013-11-24 815B 111081052 CTRL 2011 2013-11-24 826B 111082062 CTRL 2011 2013-11-24 21G 113002011 NIL 2013 2013-11-24 23G 113002031 NIL 2013 2013-11-24 24G 113002041 NIL 2013 2013-11-24 42G 113004021 NIL 2013 2013-11-24 43G 113004031 NIL 2013 2013-11-24 44G 113004041 NIL 2013 2013-11-24 206G 113020061 NIL 2013 2013-11-24 212G 113021021 NIL 2013 2013-11-24 216G 113021061 NIL 2013 2013-11-24 217G 113021071 NIL 2013 2013-11-24 218G 113021081 NIL 2013 2013-11-24 232G 113023021 NIL 2013 2013-11-24 233G 113023031 NIL 2013 2013-11-24 234G 113023041 NIL 2013 2013-11-24 235G 113023051 NIL 2013 2013-11-24 236G 113023061 NIL 2013 2013-11-24 238G 113023081 NIL 2013 2013-11-24 241G 113024011 NIL 2013 2013-11-24 251G 113025011 NIL 2013 2013-11-24 252G 113025021 NIL 2013 2013-11-24 253G 113025031 NIL 2013 2013-11-24 265G 113026051 NIL 2013 2013-11-24 269G 113026091 NIL 2013 2013-11-24 262G 113026121 NIL 2013 2013-11-24 301G 113030011 NIL 2013 2013-11-24 302G 113030021 NIL 2013 2013-11-24 303G 113030031 NIL 2013 2013-11-24 304G 113030041 NIL 2013 2013-11-24 305G 113030051 NIL 2013 2013-11-24 306G 113030061 NIL 2013 2013-11-24 313G 113031031 NIL 2013 2013-11-24 316G 113031061 NIL 2013 2013-11-24 317G 113031071 NIL 2013 2013-11-24 351G 113035011 NIL 2013 2013-11-24 352G 113035021 NIL 2013 2013-11-24 354G 113035041 NIL 2013 2013-11-24 355G 113035051 NIL 2013 2013-11-24 373G 113037031 NIL 2013 2013-11-24 374G 113037041 NIL 2013 2013-11-24 375G 113037051 NIL 2013 2013-11-24 384G 113038041 NIL 2013 2013-11-24 424G 113042041 NIL 2013 2013-11-24 431G 113043011 NIL 2013 2013-11-24 432G 113043021 NIL 2013 2013-11-24 434G 113043041 NIL 2013 2013-11-24 438G 113043081 NIL 2013 2013-11-24 430G 113043101 NIL 2013 2013-11-24 433G 113043131 NIL 2013 2013-11-24 462G 113046021 NIL 2013 2013-11-24 463G 113046031 NIL 2013 2013-11-24 464G 113046041 NIL 2013 2013-11-24 466G 113046061 NIL 2013 2013-11-24 23B 113002032 NIL 2013 2013-11-24 42B 113004022 NIL 2013 2013-11-24 92B 113009022 NIL 2013 2013-11-24 95B 113009052 NIL 2013 2013-11-24 195B 113019052 NIL 2013 2013-11-24 199B 113019092 NIL 2013 2013-11-24 204B 113020042 NIL 2013 2013-11-24 213B 113021032 NIL 2013 2013-11-24 217B 113021072 NIL 2013 2013-11-24 236B 113023062 NIL 2013 2013-11-24 238B 113023082 NIL 2013 2013-11-24 239B 113023092 NIL 2013 2013-11-24 245B 113024051 NIL 2013 2013-11-24 254B 113025042 NIL 2013 2013-11-24 305B 113030052 NIL 2013 2013-11-24 314B 113031042 NIL 2013 2013-11-24 384B 113038042 NIL 2013 2013-11-24 411B 113041012 NIL 2013 2013-11-24 418B 113041082 NIL 2013 2013-11-24 421B_A 113042012 NIL 2013 2013-11-24 425B 113042052 NIL 2013 2013-11-24 429B 113042092 NIL 2013 2013-11-24 421B_B 113042112 NIL 2013 2013-11-24 =========================================== Duroc x Hampshire F1 =========================================== Project Details: PIG PRRS data set Data and samples collected by: RJ DNA isolated by: EJ, SB File prepared by: AM(6.10.2011) Plate set-up by: EJ, SB UNL-Ciobanu Lab Columns: 1- ID 2- GeneSeek Illumina File 3- Population 6587 2011-06-21 Duroc x Hampshire 6589 2011-06-21 Duroc x Hampshire 6604 2011-06-21 Duroc x Hampshire 6612 2011-06-21 Duroc x Hampshire 6623 2011-06-21 Duroc x Hampshire 6631 2011-06-21 Duroc x Hampshire 6635 2011-06-21 Duroc x Hampshire 6645 2011-06-21 Duroc x Hampshire 6654 2011-06-21 Duroc x Hampshire 6670 2011-06-21 Duroc x Hampshire 6674 2011-06-21 Duroc x Hampshire 6684 2011-06-21 Duroc x Hampshire 7302 2011-06-21 Duroc x Hampshire 7309 2011-06-21 Duroc x Hampshire 7326 2011-06-21 Duroc x Hampshire 7341 2011-06-21 Duroc x Hampshire 7348 2011-06-21 Duroc x Hampshire 7356 2011-06-21 Duroc x Hampshire 7373 2011-06-21 Duroc x Hampshire 7380 2011-06-21 Duroc x Hampshire 7391 2011-06-21 Duroc x Hampshire 7398 2011-06-21 Duroc x Hampshire 7409 2011-06-21 Duroc x Hampshire 7420 2011-06-21 Duroc x Hampshire 7422 2011-06-21 Duroc x Hampshire 7429 2011-06-21 Duroc x Hampshire 7437 2011-06-21 Duroc x Hampshire 7453 2011-06-21 Duroc x Hampshire 7462 2011-06-21 Duroc x Hampshire 7470 2011-06-21 Duroc x Hampshire 8547 2011-06-21 Duroc x Hampshire 8554 2011-06-21 Duroc x Hampshire 8560 2011-06-21 Duroc x Hampshire 8588 2011-06-21 Duroc x Hampshire 8595 2011-06-21 Duroc x Hampshire 8601 2011-06-21 Duroc x Hampshire 8641 2011-06-21 Duroc x Hampshire 8656 2011-06-21 Duroc x Hampshire 8661 2011-06-21 Duroc x Hampshire 8678 2011-06-21 Duroc x Hampshire 8692 2011-06-21 Duroc x Hampshire Project Details: Pig PRRS Data Set DNA Isolated By: EJ File Prepared By: EJ, AM Plate Set Up: EJ, AM UNL Ciobanu Lab Columns: 1- ID 2- GeneSeek Illumina File 3- Population 6596 2011-09-20 Duroc x Hampshire 6663 2011-09-20 Duroc x Hampshire 6697 2011-09-20 Duroc x Hampshire 6707 2011-09-20 Duroc x Hampshire 6714 2011-09-20 Duroc x Hampshire 6720 2011-09-20 Duroc x Hampshire 6730 2011-09-20 Duroc x Hampshire 6738 2011-09-20 Duroc x Hampshire 6747 2011-09-20 Duroc x Hampshire 6755 2011-09-20 Duroc x Hampshire 6762 2011-09-20 Duroc x Hampshire 6765 2011-09-20 Duroc x Hampshire 6767 2011-09-20 Duroc x Hampshire 6820 2011-09-20 Duroc x Hampshire 7363 2011-09-20 Duroc x Hampshire 7445 2011-09-20 Duroc x Hampshire 7495 2011-09-20 Duroc x Hampshire 7506 2011-09-20 Duroc x Hampshire 7514 2011-09-20 Duroc x Hampshire 8578 2011-09-20 Duroc x Hampshire 8608 2011-09-20 Duroc x Hampshire 8613 2011-09-20 Duroc x Hampshire 8624 2011-09-20 Duroc x Hampshire 8640 2011-09-20 Duroc x Hampshire 8684 2011-09-20 Duroc x Hampshire 8702 2011-09-20 Duroc x Hampshire 8722 2011-09-20 Duroc x Hampshire 8739 2011-09-20 Duroc x Hampshire 8863 2011-09-20 Duroc x Hampshire 8872 2011-09-20 Duroc x Hampshire 8882 2011-09-20 Duroc x Hampshire 8902 2011-09-20 Duroc x Hampshire 8908 2011-09-20 Duroc x Hampshire 8916 2011-09-20 Duroc x Hampshire 8922 2011-09-20 Duroc x Hampshire 8930 2011-09-20 Duroc x Hampshire 8937 2011-09-20 Duroc x Hampshire 8948 2011-09-20 Duroc x Hampshire 8960 2011-09-20 Duroc x Hampshire 8969 2011-09-20 Duroc x Hampshire 8983 2011-09-20 Duroc x Hampshire 8991 2011-09-20 Duroc x Hampshire 9000 2011-09-20 Duroc x Hampshire 9203 2011-09-20 Duroc x Hampshire 9220 2011-09-20 Duroc x Hampshire 9225 2011-09-20 Duroc x Hampshire 9235 2011-09-20 Duroc x Hampshire 9248 2011-09-20 Duroc x Hampshire 9259 2011-09-20 Duroc x Hampshire 9276 2011-09-20 Duroc x Hampshire 8725 2011-09-20 Duroc x Hampshire ========================== == end == ==========================